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Phatr43773 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43773" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43773Predicted protein (398 aa)    
Predicted Functional Partners:
Phatr43469
Predicted protein (320 aa)
       
  0.950
Phatr9794
Predicted protein (404 aa)
     
  0.949
Phatr8860
Annotation not available (577 aa)
       
  0.946
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
       
  0.941
Phatr42446
Predicted protein (315 aa)
       
  0.941
Phatr11916
Predicted protein (144 aa)
       
  0.941
Phatr1971
Predicted protein (492 aa)
     
 
  0.932
Phatr20460
Predicted protein (499 aa)
         
  0.930
Phatr37086
Predicted protein (226 aa)
     
 
  0.909
Phatr33864
Predicted protein (465 aa)
     
 
  0.909
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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