STRINGSTRING
Phatr43944 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43944" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43944Predicted protein (493 aa)    
Predicted Functional Partners:
Phatr22919
Predicted protein (260 aa)
  0.999
Phatr41645
Predicted protein (166 aa)
   
  0.995
Phatr14260
Predicted protein (163 aa)
 
  0.995
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
     
  0.985
Phatr17671
Predicted protein (397 aa)
     
  0.962
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
     
  0.922
Phatr20787
Predicted protein (473 aa)
     
 
  0.920
Phatr28620
Predicted protein (136 aa)
     
  0.862
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
   
      0.849
Phatr50525
Predicted protein (688 aa)
     
  0.799
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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