STRINGSTRING
Phatr43990 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43990" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43990Predicted protein (313 aa)    
Predicted Functional Partners:
Phatr47759
Predicted protein (790 aa)
     
  0.986
Phatr44632
Predicted protein (1440 aa)
       
  0.980
Phatr46643
Predicted protein (606 aa)
     
  0.778
helicase_5
Predicted protein (428 aa)
     
  0.771
Phatr54743
Predicted protein (347 aa)
   
 
    0.639
Phatr13526
Predicted protein (321 aa)
   
        0.524
Phatr18217
Predicted protein (326 aa)
   
        0.522
Phatr21983
Predicted protein (484 aa)
   
        0.513
Phatr43401
Predicted protein (564 aa)
   
          0.509
Phatr14176
Predicted protein (438 aa)
   
          0.509
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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