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Phatr44014 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44014" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44014Predicted protein (533 aa)    
Predicted Functional Partners:
GDCP
Glycine decarboxylase p-protein (1005 aa)
       
    0.568
Gsr_1
Glutathione-disulfide reductase (507 aa)
   
 
    0.540
Gsr_2
Glutathione reductase (496 aa)
   
 
    0.540
Phatr48393
Predicted protein (654 aa)
       
    0.537
Phatr45428
Predicted protein (675 aa)
       
    0.537
Phatr42129
Annotation not available (479 aa)
       
    0.537
pDLDH1
Lipoamide dehydrogenase (543 aa)
       
    0.537
DLDH
Dihydrolipoyl dehydrogenase (500 aa)
       
    0.537
Phatr19949
Predicted protein (393 aa)
       
    0.537
Phatr16069
Predicted protein (532 aa)
       
    0.537
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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