STRINGSTRING
Phatr44050 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44050" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44050Predicted protein (125 aa)    
Predicted Functional Partners:
Phatr29711
Predicted protein (221 aa)
     
  0.988
Phatr51058
Predicted protein (255 aa)
     
  0.985
Phatr10862
Annotation not available (309 aa)
     
  0.984
Phatr31133
Predicted protein (115 aa)
     
  0.984
Phatr24978
Predicted protein (506 aa)
     
  0.984
Phatr43023
Predicted protein (524 aa)
     
  0.973
Phatr15844
Predicted protein (120 aa)
     
  0.973
Phatr28794
Predicted protein; Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase (818 aa)
       
  0.970
Phatr21030
Predicted protein (390 aa)
     
  0.952
Phatr27923
Predicted protein (623 aa)
     
  0.920
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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