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PetJ protein (Phaeodactylum tricornutum) - STRING interaction network
"PetJ" - Cytochrome c6, cytochrome c553 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PetJCytochrome c6, cytochrome c553 (133 aa)    
Predicted Functional Partners:
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
 
 
  0.907
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
 
  0.745
FtrB
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (121 aa)
   
     
  0.708
Atp1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (509 aa)
           
  0.637
petC
Cytochrome b6-f complex iron-sulfur subunit (217 aa)
   
   
  0.598
PsbM
Photosystem II subunit (108 aa)
           
  0.558
Tpt1
Triose phosphate/phosphate translocator (385 aa)
           
  0.542
AtpC
Precursor of ATPase ATPase gamma subunit; ATP synthase gamma chain, chloroplastic (369 aa)
           
  0.532
Phatr31367
Predicted protein (819 aa)
         
  0.512
Phatr44482
Predicted protein (600 aa)
     
 
  0.498
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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