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Phatr44062 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44062" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44062Predicted protein (1943 aa)    
Predicted Functional Partners:
MER3
Mer3 meiotic cross-over helicase (154 aa)
     
  0.804
Phatr25
Predicted protein (1589 aa)
     
  0.804
Phatr54743
Predicted protein (347 aa)
     
  0.779
Phatrdraft1638
Predicted protein (548 aa)
     
  0.777
Phatr19982
Predicted protein (2347 aa)
     
  0.775
Phatr23164
Predicted protein (489 aa)
     
  0.774
Phatr12309
Predicted protein (134 aa)
       
  0.743
Phatr34712
Predicted protein (662 aa)
     
  0.721
Phatr26061
Predicted protein (552 aa)
     
  0.720
Phatr43418
Predicted protein (503 aa)
       
  0.707
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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