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STRINGSTRING
Phatr44229 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44229" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44229Predicted protein (818 aa)    
Predicted Functional Partners:
hCDK6
Predicted protein; Belongs to the protein kinase superfamily (258 aa)
     
 
  0.808
Phatr18549
Predicted protein (1250 aa)
     
 
    0.800
Phatrdraft800
Serine/threonine-protein phosphatase (317 aa)
         
    0.800
Phatr51017
Serine/threonine-protein phosphatase (317 aa)
         
    0.800
Phatr36142
Predicted protein (320 aa)
         
    0.800
Phatr22247
Serine/threonine-protein phosphatase (363 aa)
         
    0.800
Phatr21660
Serine/threonine-protein kinase TOR (2400 aa)
         
    0.800
Phatr30282
Predicted protein; Belongs to the PI3/PI4-kinase family (341 aa)
           
  0.560
Phatr30898
Vacuolar protein; Belongs to the AAA ATPase family (429 aa)
           
  0.558
PSY
Phytoene synthase (309 aa)
           
  0.455
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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