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STRINGSTRING
Phatr44239 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44239" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44239Predicted protein (1180 aa)    
Predicted Functional Partners:
Phatr46891
Predicted protein (1007 aa)
     
 
  0.993
Phatr43057
Predicted protein (1315 aa)
     
 
  0.993
Phatr48390
Predicted protein (1780 aa)
     
 
  0.993
Phatr43499
Predicted protein (676 aa)
     
 
  0.993
Sec13
Predicted protein; Belongs to the WD repeat SEC13 family (330 aa)
     
 
  0.992
Phatr21147
Predicted protein (307 aa)
     
 
  0.949
Phatr8310
Predicted protein (77 aa)
     
 
  0.848
Phatr8301
Predicted protein (80 aa)
     
 
  0.848
Phatr4700
Predicted protein; Belongs to the WD repeat SEC13 family (325 aa)
     
 
  0.848
Phatr14103
Predicted protein (298 aa)
       
 
  0.846
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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