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Phatr44382 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44382" - ATP-dependent Clp protease proteolytic subunit in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44382ATP-dependent Clp protease proteolytic subunit (260 aa)    
Predicted Functional Partners:
Phatr11217
Predicted protein (340 aa)
 
  0.743
Phatr41790
Predicted protein (448 aa)
   
 
  0.592
Phatr18202
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family (882 aa)
 
 
  0.552
Phatr51134
Predicted protein; Belongs to the ClpA/ClpB family (887 aa)
   
 
  0.452
Phatr26173
Predicted protein (768 aa)
   
 
  0.452
Phatr25856
Predicted protein; Belongs to the ClpA/ClpB family (997 aa)
   
 
  0.452
Phatr16455
Predicted protein; Belongs to the ClpA/ClpB family (683 aa)
   
 
  0.452
CPN60_2
Nuclear-encoded-like protein of chloroplast gro; Belongs to the chaperonin (HSP60) family (580 aa)
 
   
  0.451
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.446
Phatr14260
Predicted protein (163 aa)
   
   
  0.443
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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