• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr44391 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44391" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44391Predicted protein (486 aa)    
Predicted Functional Partners:
Phatr54536
Predicted protein (859 aa)
 
     
  0.678
Phatr50155
Chitinase chitin binding glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 18 family (525 aa)
           
  0.582
Phatr46067
Chitin binding (502 aa)
           
  0.574
Cbs
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family (469 aa)
           
  0.557
Phatr30786
Xylose isomerase (445 aa)
         
  0.553
Phatr16856
Beta-glucosidase (441 aa)
         
  0.549
Phatr40052
Predicted protein (377 aa)
   
   
  0.528
Phatr12313
Beta-xylosidase (605 aa)
 
   
  0.496
Phatr54681
Endo-1,3-beta-glucosidase (1028 aa)
 
     
  0.494
Phatr54973
Endo-1,3-beta-glucosidase (467 aa)
 
     
  0.492
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]