STRINGSTRING
Phatr44459 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44459" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44459Predicted protein (203 aa)    
Predicted Functional Partners:
Phatr44298
Predicted protein (1736 aa)
     
  0.993
Phatr47943
Predicted protein (1167 aa)
     
  0.993
Phatr23959
Predicted protein; Binds the poly(A) tail of mRNA (605 aa)
       
  0.912
Phatr9731
Predicted protein (155 aa)
         
  0.910
Phatr25743
Predicted protein (414 aa)
     
  0.830
Phatr25184
Predicted protein (623 aa)
     
  0.830
Phatr9829
Predicted protein (181 aa)
         
 
0.800
Phatr49355
Predicted protein (549 aa)
         
    0.800
Phatr8270
Predicted protein (84 aa)
     
  0.762
Phatr8269
Predicted protein (77 aa)
     
  0.762
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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