STRINGSTRING
Phatr44486 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44486" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44486Predicted protein (834 aa)    
Predicted Functional Partners:
Phatr17772
Predicted protein (1313 aa)
         
  0.517
Phatr47407
Predicted protein (652 aa)
              0.495
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.472
Phatr24739
Predicted protein (1594 aa)
   
   
  0.472
Phatr36359
Predicted protein; Adds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precusrosor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER) (266 aa)
   
   
  0.441
Phatr11438
Predicted protein; Adds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precusrosor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER) (247 aa)
   
   
  0.441
Phatr45701
Predicted protein (444 aa)
     
      0.435
Phatr12989
Predicted protein (363 aa)
     
      0.435
Phatrdraft559
Predicted protein (368 aa)
   
   
  0.428
Phatr7678
Predicted protein (134 aa)
   
   
  0.428
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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