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Phatr44512 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44512" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44512Predicted protein (340 aa)    
Predicted Functional Partners:
Phatr27735
Predicted protein (538 aa)
   
  0.999
Phatr46289
Predicted protein (338 aa)
     
  0.998
Phatr34923
Predicted protein (312 aa)
   
  0.970
MARK3
Predicted protein (511 aa)
     
  0.929
Phatr17772
Predicted protein (1313 aa)
   
 
  0.860
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
     
  0.847
ACC2
Biotin carboxylase (2282 aa)
   
  0.839
Phatr47067
Predicted protein (1237 aa)
   
   
  0.821
ACL
Atp-citrate synthase (1082 aa)
   
  0.777
Phatr13617
Predicted protein (201 aa)
       
  0.765
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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