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STRINGSTRING
Phatr44603 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44603" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44603Predicted protein (220 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (501 aa)
   
 
  0.999
AtpC
Precursor of ATPase ATPase gamma subunit; ATP synthase gamma chain, chloroplastic (369 aa)
   
 
  0.972
Phatr18398
Predicted protein; ATP synthase gamma chain (305 aa)
   
 
  0.972
Phatr20787
Predicted protein; Belongs to the peptidase M16 family (473 aa)
     
 
  0.969
Phatr31465
Predicted protein (679 aa)
   
 
  0.968
Atp1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (509 aa)
   
 
  0.968
Phatr26515
Predicted protein (272 aa)
     
 
  0.948
Phatr14260
Predicted protein (163 aa)
   
   
  0.935
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
   
   
  0.922
Phatr10356
Succinate dehydrogenase cytochrome b subunit (125 aa)
   
   
  0.917
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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