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Phatr44606 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44606" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44606Predicted protein (130 aa)    
Predicted Functional Partners:
Phatr8096
Predicted protein (67 aa)
     
  0.921
Phatr44351
Predicted protein (510 aa)
     
  0.817
Phatrdraft218
Predicted protein (125 aa)
     
  0.805
Phatr7114
Predicted protein (136 aa)
     
  0.721
Phatr3171
Predicted protein (220 aa)
     
  0.645
Phatr15032
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (157 aa)
     
  0.633
Phatr12188
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (100 aa)
     
  0.633
Phatr9409
Predicted protein (70 aa)
       
  0.617
Phatr8469
Predicted protein (61 aa)
       
  0.617
Phatr7934
Predicted protein (66 aa)
       
  0.617
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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