STRINGSTRING
Phatr44729 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44729" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44729Predicted protein (699 aa)    
Predicted Functional Partners:
Phatr8270
Predicted protein (84 aa)
       
 
  0.741
Phatr8269
Predicted protein (77 aa)
       
 
  0.741
Phatr46145
Predicted protein (393 aa)
       
 
  0.741
Phatr16633
Predicted protein (81 aa)
       
 
  0.741
Phatr9806
Predicted protein (195 aa)
     
 
  0.701
Phatr47737
Predicted protein (361 aa)
     
 
  0.637
Phatrdraft286
Predicted protein (104 aa)
       
 
  0.632
Phatr44442
Predicted protein (269 aa)
       
 
  0.632
Phatr11308
Predicted protein (89 aa)
       
 
  0.632
hBRM
Predicted protein (995 aa)
     
      0.556
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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