STRINGSTRING
Phatr44751 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44751" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44751Predicted protein (376 aa)    
Predicted Functional Partners:
Phatr27735
Predicted protein (538 aa)
   
   
  0.680
Phatr16725
Predicted protein (115 aa)
     
 
  0.627
Phatr47293
Predicted protein (580 aa)
       
    0.568
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
         
  0.561
Phatr5546
Predicted protein (172 aa)
   
   
  0.551
Phatr4761
Predicted protein (163 aa)
   
   
  0.551
Phatr46460
Predicted protein (1448 aa)
   
   
  0.551
Phatr44042
Predicted protein (578 aa)
   
   
  0.551
Phatr42642
Predicted protein (696 aa)
   
   
  0.551
Phatr38270
Predicted protein (583 aa)
   
   
  0.551
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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