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Phatr44765 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44765" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44765Predicted protein (1353 aa)    
Predicted Functional Partners:
Phatr50280
Predicted protein (661 aa)
     
  0.897
Phatr49507
Predicted protein (1564 aa)
     
  0.875
MCM3
Predicted protein (551 aa)
     
   
  0.809
Phatr44165
Predicted protein (1356 aa)
     
  0.732
SMC2
Predicted protein (1213 aa)
     
  0.698
Phatr48922
Predicted protein (965 aa)
     
   
  0.695
RBR
Predicted protein (1198 aa)
     
 
    0.669
MCM5
Predicted protein (667 aa)
     
   
  0.653
Phatr43664
Predicted protein (655 aa)
     
        0.645
MCM4
Predicted protein (791 aa)
     
        0.624
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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