STRINGSTRING
Phatr44779 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44779" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44779Predicted protein (1196 aa)    
Predicted Functional Partners:
Phatrdraft800
Serine/threonine-protein phosphatase (317 aa)
       
  0.708
Phatr51017
Serine/threonine-protein phosphatase (317 aa)
       
  0.708
Phatr47351
Predicted protein (359 aa)
       
  0.708
Phatr43482
Predicted protein (1225 aa)
       
  0.708
Phatr42169
Serine/threonine-protein phosphatase (315 aa)
       
  0.708
PPP5
PP5/FYPP plant-like protein (511 aa)
       
  0.708
Phatr22247
Serine/threonine-protein phosphatase (363 aa)
       
  0.708
Phatr11777
Serine/threonine-protein phosphatase (309 aa)
       
  0.708
Phatr11477
Serine/threonine-protein phosphatase (318 aa)
       
  0.708
Phatr15286
Predicted protein (104 aa)
       
 
  0.661
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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