STRINGSTRING
Phatr44806 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44806" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44806Predicted protein (585 aa)    
Predicted Functional Partners:
Phatr15730
Predicted protein (442 aa)
       
  0.950
Phatr48977
Predicted protein (354 aa)
         
  0.931
Phatr20082
Predicted protein (716 aa)
     
 
  0.929
APC8
Predicted protein (648 aa)
     
  0.838
APC7
Predicted protein (572 aa)
       
  0.832
APC10
Predicted protein (148 aa)
       
  0.828
APC2
Predicted protein (767 aa)
       
    0.824
APC3
Predicted protein (336 aa)
     
  0.714
Phatr45416
Predicted protein (632 aa)
       
    0.560
Phatrdraft79
Predicted protein (444 aa)
       
 
  0.512
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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