STRINGSTRING
Phatr44815 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44815" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44815Predicted protein (401 aa)    
Predicted Functional Partners:
Phatr42907
Acyl-coenzyme A dehydrogenase (443 aa)
   
  0.902
FAO1
Peroxisomal bifunctional enzyme (767 aa)
 
 
    0.716
Phatr35240
Predicted protein (684 aa)
   
 
    0.650
Phatr54528
Enoyl-coa hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (385 aa)
   
 
    0.474
DEI1
Delta-3,5-delta-2,4-dienoyl-CoA isomerase (291 aa)
     
 
    0.463
Phatr5527
Predicted protein (170 aa)
   
 
    0.460
Phatr8706
Predicted protein (398 aa)
   
        0.433
Phatr43298
Predicted protein (298 aa)
   
        0.433
Phatr37572
Predicted protein (977 aa)
   
        0.433
Phatr36168
Predicted protein (340 aa)
   
        0.433
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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