STRINGSTRING
Phatr44833 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44833" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44833Predicted protein (461 aa)    
Predicted Functional Partners:
Phatr31919
Predicted protein (305 aa)
   
  0.994
Phatr23324
Predicted protein (176 aa)
   
  0.993
Phatr10617
Predicted protein (229 aa)
 
  0.987
Phatr13361
Predicted protein (389 aa)
   
  0.984
rpl2
Predicted protein (257 aa)
   
  0.981
Phatr29097
Predicted protein (225 aa)
   
  0.969
Phatr5769
Predicted protein (190 aa)
   
  0.966
Phatr10774
Predicted protein (167 aa)
   
  0.966
Phatr43162
Predicted protein (146 aa)
   
  0.965
Phatr14915
Predicted protein (200 aa)
   
  0.955
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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