STRINGSTRING
Phatr44863 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44863" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44863Predicted protein (956 aa)    
Predicted Functional Partners:
Phatr54743
Predicted protein (347 aa)
     
 
  0.900
Phatrdraft1638
Predicted protein (548 aa)
     
 
  0.899
Phatr34712
Predicted protein (662 aa)
     
 
  0.880
Phatr12309
Predicted protein (134 aa)
       
 
  0.865
Phatr14032
Predicted protein (467 aa)
   
 
  0.747
Phatr48911
Predicted protein (631 aa)
     
  0.745
Phatr33610
Predicted protein (729 aa)
     
  0.745
Phatr47067
Predicted protein (1237 aa)
   
   
  0.727
Phatr46259
Predicted protein (589 aa)
   
 
  0.720
Phatr43135
Predicted protein (587 aa)
   
 
  0.720
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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