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STRINGSTRING
Phatr44899 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44899" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44899Predicted protein (288 aa)    
Predicted Functional Partners:
Phatr13895
Predicted protein (330 aa)
   
   
  0.821
Phatr12759
Predicted protein (275 aa)
     
   
  0.669
Phatr24006
Predicted protein (749 aa)
     
   
  0.608
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
   
  0.595
Phatr11022
Predicted protein (366 aa)
   
   
  0.535
Phatr48359
Predicted protein (218 aa)
   
   
  0.519
Phatr14996
Predicted protein (85 aa)
   
        0.497
Phatr43556
Predicted protein (249 aa)
   
        0.497
Phatr11792
Predicted protein (278 aa)
   
        0.494
Phatr9078
Predicted protein (105 aa)
   
        0.476
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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