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Phatr44900 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44900" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44900Predicted protein (402 aa)    
Predicted Functional Partners:
Phatr1129
Predicted protein (562 aa)
   
  0.629
Phatr50770
Predicted protein (549 aa)
   
   
  0.470
Phatr43611
Predicted protein (474 aa)
   
   
  0.458
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.449
Phatr27735
Predicted protein (538 aa)
   
   
  0.444
Phatr50084
Predicted protein (260 aa)
     
 
  0.419
Phatr14785
Predicted protein (176 aa)
     
 
  0.419
Phatrdraft487
Predicted protein (355 aa)
   
 
  0.406
Phatr8975
Predicted protein (350 aa)
   
 
  0.406
Phatr36821
Predicted protein (386 aa)
   
 
  0.406
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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