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Phatr44906 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44906" - Formyltetrahydrofolate deformylase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44906Formyltetrahydrofolate deformylase (304 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
   
   
  0.926
Phatr17772
Predicted protein (1313 aa)
   
 
  0.887
Phatr23429
Predicted protein (615 aa)
   
 
  0.841
Phatr1840
Predicted protein (503 aa)
   
 
  0.816
Phatr18087
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (499 aa)
   
 
  0.810
Phatr25204
Predicted protein (598 aa)
   
 
  0.749
Phatr18080
Predicted protein; Phosphoribosylaminoimidazole-succinocarboxamide synthase (268 aa)
   
 
  0.749
Phatr47067
Predicted protein (1237 aa)
 
   
0.721
Phatr21868
Predicted protein (186 aa)
   
   
  0.598
FTHFS
Fomate-tetrahydrofolate ligase (666 aa)
   
   
  0.566
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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