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STRINGSTRING
Phatr44981 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44981" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44981Predicted protein (367 aa)    
Predicted Functional Partners:
Phatr31663
Predicted protein (192 aa)
   
 
  0.691
PHATR_2432
Predicted protein (305 aa)
     
   
  0.672
Phatr48620
Predicted protein (645 aa)
   
 
  0.670
Phatr51407
Pol1-like DNA polymerase (774 aa)
   
   
  0.662
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
   
   
  0.639
Phatr12605
Predicted protein (615 aa)
   
   
  0.630
Phatr43748
Predicted protein (232 aa)
         
  0.583
Phatr14212
Predicted protein (308 aa)
         
  0.580
Phatr27534
Predicted protein (210 aa)
           
  0.550
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
         
  0.542
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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