STRINGSTRING
Phatr44984 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr44984" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr44984Predicted protein (552 aa)    
Predicted Functional Partners:
Phatr21296
Biotin synthase (437 aa)
   
 
  0.852
Phatr41807
Predicted protein (407 aa)
   
 
  0.739
Phatr36165
Predicted protein (448 aa)
   
 
  0.739
Phatr10378
Predicted protein (486 aa)
   
 
  0.739
Phatr10902
Predicted protein (473 aa)
       
  0.600
Phatr46706
Predicted protein (335 aa)
         
  0.524
ACC2
Biotin carboxylase (2282 aa)
         
  0.463
Phatr41702
Predicted protein (671 aa)
   
   
  0.452
Phatrdraft1682
Anthranilate synthase (927 aa)
   
   
  0.443
Phatr17238
Anthranilate synthase (958 aa)
   
   
  0.443
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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