STRINGSTRING
Phatr45009 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45009" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45009Predicted protein (498 aa)    
Predicted Functional Partners:
Phatr50228
Predicted protein (904 aa)
     
  0.991
Phatr42944
Predicted protein (1422 aa)
       
  0.985
Phatr47054
Predicted protein (450 aa)
     
  0.984
Phatr10199
Predicted protein (203 aa)
     
  0.981
Phatr1785
Predicted protein (433 aa)
     
  0.971
PHATR_2957
Predicted protein (338 aa)
     
  0.969
Phatr42892
Predicted protein (4067 aa)
     
  0.948
Phatr44745
Predicted protein (1075 aa)
     
  0.824
Phatrdraft292
Predicted protein (91 aa)
     
  0.766
Phatr7969
Predicted protein (71 aa)
     
  0.766
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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