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STRINGSTRING
Phatr45116 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45116" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45116Predicted protein (1843 aa)    
Predicted Functional Partners:
Phatr20308
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
     
 
  0.665
hBRM
Predicted protein (995 aa)
     
   
  0.637
Phatr26750
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
       
 
  0.627
Phatr49385
Predicted protein (1125 aa)
   
 
  0.612
Phatr43821
Predicted protein (631 aa)
     
 
  0.596
Phatr11009
Predicted protein (535 aa)
     
 
  0.583
Phatr50124
Predicted protein (1144 aa)
   
 
  0.557
Phatr47619
Predicted protein (1565 aa)
     
 
  0.556
Phatr42940
Predicted protein (1337 aa)
     
 
  0.504
Phatr50218
Predicted protein (1307 aa)
     
 
  0.503
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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