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Phatr45239 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45239" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45239Predicted protein (1097 aa)    
Predicted Functional Partners:
AAT_2
Aspartate aminotransferase (426 aa)
     
  0.958
AAT_1
Aspartate transaminase (435 aa)
     
  0.958
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
       
  0.945
Phatr24739
Predicted protein (1594 aa)
       
  0.945
Phatr31906
Aldehyde dehydrogenase (551 aa)
       
  0.935
Phatr51092
Glutamine synthetase (416 aa)
         
  0.935
Phatrdraft475
Predicted protein (464 aa)
     
 
  0.935
Phatr34010
Predicted protein (475 aa)
     
 
  0.935
Phatr12902
Predicted protein (536 aa)
         
    0.928
GltD
Synthase of glutamate synthase (580 aa)
       
  0.907
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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