STRINGSTRING
Phatr45294 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45294" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45294Predicted protein (277 aa)    
Predicted Functional Partners:
Phatr21181
Predicted protein (323 aa)
       
  0.935
Phatr50741
Predicted protein (173 aa)
         
  0.930
Phatr16065
Predicted protein (252 aa)
       
      0.547
Phatr38534
Predicted protein (204 aa)
       
      0.477
Phatr22388
Peroxiredoxin (233 aa)
       
      0.477
Phatr14898
Predicted protein (139 aa)
       
      0.477
Phatr14770
Predicted protein (171 aa)
       
      0.452
Phatr21868
Predicted protein (186 aa)
           
  0.424
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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