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Phatr45509 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45509" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45509Predicted protein (723 aa)    
Predicted Functional Partners:
Phatr25840
Predicted protein (1128 aa)
         
  0.946
Phatr23552
Predicted protein (1060 aa)
         
  0.946
Phatr12501
Predicted protein (238 aa)
   
 
  0.943
Phatr4074
Predicted protein (273 aa)
         
    0.900
Phatr40650
Predicted protein (582 aa)
       
  0.872
Phatr49101
Predicted protein (174 aa)
       
  0.849
Phatr32661
Predicted protein (237 aa)
       
  0.849
Phatr29887
Predicted protein (564 aa)
   
  0.843
Phatr27735
Predicted protein (538 aa)
   
 
  0.757
Phatr16599
Predicted protein; Involved in the catabolism of quinolinic acid (QA) (294 aa)
       
  0.752
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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