STRINGSTRING
Phatr45518 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45518" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45518Predicted protein (918 aa)    
Predicted Functional Partners:
FUM1
Precursor of fumarase fumarase (567 aa)
              0.491
Phatr42917
Predicted protein (509 aa)
     
 
  0.478
Phatr49544
Predicted protein (329 aa)
       
 
  0.470
Phatr49462
Predicted protein (359 aa)
       
 
  0.470
Phatr43469
Predicted protein (320 aa)
       
 
  0.470
Phatr31662
Predicted protein (392 aa)
       
 
  0.470
Phatr8860
Annotation not available (577 aa)
     
   
  0.441
Phatr49702
Predicted protein (959 aa)
     
   
  0.441
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
         
  0.410
Phatr42446
Predicted protein (315 aa)
         
  0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (3%) [HD]