STRINGSTRING
Phatr45548 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45548" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45548Predicted protein (613 aa)    
Predicted Functional Partners:
Phatr6586
Predicted protein (152 aa)
     
  0.984
Phatr19568
Predicted protein (485 aa)
     
  0.982
Phatr50825
Predicted protein (451 aa)
     
  0.979
Phatr4016
Predicted protein (248 aa)
     
  0.966
Phatr12368
Predicted protein (126 aa)
     
  0.966
Phatr3281
Predicted protein (354 aa)
     
 
  0.961
Phatr45153
Predicted protein (523 aa)
     
  0.960
ARP
Actin related protein (463 aa)
     
  0.960
Phatr47425
Predicted protein (394 aa)
     
  0.950
Phatr42892
Predicted protein (4067 aa)
     
  0.943
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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