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STRINGSTRING
Phatr45580 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45580" - Coronin like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45580Coronin like protein; Belongs to the WD repeat coronin family (450 aa)    
Predicted Functional Partners:
Phatr33325
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (249 aa)
     
        0.974
Phatr15613
Predicted protein; Belongs to the actin-binding proteins ADF family (123 aa)
     
 
  0.919
Phatr48381
Predicted protein (715 aa)
       
 
  0.906
Phatr9601
Protein of f-actin capping protein (214 aa)
       
 
  0.847
Phatr46058
Formin like protein (2015 aa)
     
 
  0.826
Phatr13047
Predicted protein; Adenylyl cyclase-associated protein (137 aa)
     
 
  0.803
Phatr7173
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (143 aa)
   
 
  0.703
ACT1
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.681
ARP1
Actin related protein; Belongs to the actin family (391 aa)
     
 
  0.681
Phatr29812
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.681
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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