STRINGSTRING
Phatr45596 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45596" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45596Predicted protein (736 aa)    
Predicted Functional Partners:
Phatr45431
Predicted protein (1158 aa)
       
  0.618
Phatr8058
Predicted protein (79 aa)
       
  0.616
Phatr49093
Predicted protein (1260 aa)
       
  0.616
Phatr49054
Predicted protein (853 aa)
       
  0.616
Phatr48163
Predicted protein (783 aa)
       
  0.616
Phatr47422
Predicted protein (166 aa)
       
  0.616
Phatr45911
Predicted protein (325 aa)
       
  0.616
Phatr44592
Predicted protein (363 aa)
       
  0.616
Phatr44076
Predicted protein (260 aa)
       
  0.616
Phatr42811
Predicted protein (449 aa)
       
  0.616
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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