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Phatr45621 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45621" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45621Predicted protein (426 aa)    
Predicted Functional Partners:
Phatr43312
Predicted protein (627 aa)
 
 
0.716
Phatr13154
Predicted protein (885 aa)
   
   
  0.674
Phatr14927
Predicted protein (87 aa)
       
 
  0.643
Phatr9538
Predicted protein (593 aa)
         
  0.610
Phatr12902
Predicted protein (536 aa)
         
  0.610
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.604
Phatr51720
Fumarate reductase flavoprotein (668 aa)
         
  0.591
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
     
 
  0.588
Phatr31906
Aldehyde dehydrogenase (551 aa)
     
 
  0.588
SSDH
Succinate semialdehyde dehydrogenase (471 aa)
     
 
  0.588
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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