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STRINGSTRING
Phatr45672 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45672" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45672Predicted protein (557 aa)    
Predicted Functional Partners:
Phatr35064
Predicted protein (348 aa)
           
  0.772
Phatr33116
Predicted protein (1057 aa)
           
  0.628
Phatr14518
Predicted protein (279 aa)
           
  0.626
Phatr17671
Predicted protein (397 aa)
     
   
  0.621
Phatr11281
Predicted protein (169 aa)
           
  0.582
Phatr11131
Predicted protein (207 aa)
           
  0.582
Phatr11826
TRD4; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (475 aa)
   
   
  0.473
Phatr2164
Predicted protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (474 aa)
   
   
  0.458
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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