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Phatr45681 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45681" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45681Predicted protein (591 aa)    
Predicted Functional Partners:
Phatr36955
Predicted protein (132 aa)
       
  0.849
Phatr11462
Predicted protein (130 aa)
       
  0.849
Phatr25666
Predicted protein (885 aa)
     
        0.831
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
        0.800
Phatr51897
Predicted protein (531 aa)
     
        0.799
Phatr47058
Predicted protein (606 aa)
     
        0.761
Phatr47947
G-protein beta-subunit (501 aa)
     
        0.722
Phatr47176
Predicted protein (435 aa)
     
 
  0.714
Phatr25394
Predicted protein (528 aa)
     
 
  0.714
Phatr44047
Predicted protein (463 aa)
     
        0.681
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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