STRINGSTRING
Phatr45692 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45692" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45692Predicted protein (700 aa)    
Predicted Functional Partners:
Phatr16560
Predicted protein (269 aa)
     
  0.978
Phatrdraft509
Predicted protein (308 aa)
     
  0.978
Phatr12921
Predicted protein (240 aa)
     
  0.977
Phatr16766
Predicted protein (140 aa)
     
  0.977
Phatr37291
Predicted protein (248 aa)
     
  0.977
Phatr23286
Predicted protein (274 aa)
     
  0.962
Phatr12322
Predicted protein (212 aa)
     
  0.962
Phatr50326
Predicted protein (998 aa)
     
  0.955
Phatr43677
Predicted protein (813 aa)
   
  0.914
Phatr38965
Predicted protein (1383 aa)
   
  0.914
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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