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Phatr45698 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45698" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45698Predicted protein (908 aa)    
Predicted Functional Partners:
Phatr32759
Predicted protein (879 aa)
     
  0.959
Phatr14850
Predicted protein (653 aa)
     
  0.945
Phatr50446
Predicted protein (1157 aa)
       
  0.835
Phatr8918
Predicted protein (190 aa)
     
 
  0.697
Phatr43008
Predicted protein (629 aa)
     
  0.472
Phatr9033
Predicted protein (268 aa)
       
 
  0.440
Phatr43830
Vacuolar protein sorting-associated protein 35 (1712 aa)
     
   
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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