STRINGSTRING
Phatr45898 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45898" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45898Predicted protein (750 aa)    
Predicted Functional Partners:
Phatr19982
Predicted protein (2347 aa)
     
  0.973
Phatr33304
Predicted protein (122 aa)
       
  0.964
Phatr8518
Predicted protein (66 aa)
       
  0.943
Phatr20588
Predicted protein (87 aa)
       
    0.871
Phatr42364
Predicted protein (89 aa)
       
  0.856
Phatr20135
Predicted protein (690 aa)
     
  0.851
MER3
Mer3 meiotic cross-over helicase (154 aa)
     
  0.835
Phatr25
Predicted protein (1589 aa)
     
  0.835
Phatr14572
Predicted protein (219 aa)
       
  0.826
Phatr10494
Predicted protein (98 aa)
       
  0.815
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]