• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr45914 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45914" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45914Predicted protein (746 aa)    
Predicted Functional Partners:
Phatr47127
Predicted protein (517 aa)
     
 
  0.996
MRE11
Predicted protein (550 aa)
     
 
  0.967
RAD50
RAD50 recombination protein (1436 aa)
     
 
  0.942
Phatr46698
Predicted protein (464 aa)
     
 
  0.936
Phatr33013
Predicted protein (571 aa)
     
 
  0.929
Phatr44708
Predicted protein (790 aa)
       
 
  0.924
Phatr51040
Predicted protein (607 aa)
     
 
  0.921
Rad22
Predicted protein (468 aa)
     
 
  0.921
RPA2
Predicted protein (270 aa)
     
 
  0.916
Phatr49149
Predicted protein (570 aa)
       
 
  0.911
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]