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Phatr45961 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45961" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45961Predicted protein (366 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
       
  0.720
Phatr49666
Predicted protein (540 aa)
       
  0.455
Phatr43724
Predicted protein (890 aa)
       
  0.455
Phatr1196
Predicted protein (304 aa)
       
  0.455
Phatr49571
Predicted protein (1000 aa)
       
    0.406
Phatr46793
Predicted protein (329 aa)
       
    0.406
Phatr46346
Predicted protein (716 aa)
       
    0.406
Phatr44263
Predicted protein (1017 aa)
       
    0.406
Phatr44011
Predicted protein (899 aa)
       
    0.406
Phatr39117
Predicted protein (587 aa)
       
    0.406
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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