STRINGSTRING
Phatr45980 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45980" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45980Predicted protein (348 aa)    
Predicted Functional Partners:
Phatr44117
Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase (532 aa)
     
  0.977
Phatr9724
Predicted protein (371 aa)
   
 
  0.949
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
     
 
  0.943
Phatr48523
Predicted protein (551 aa)
         
    0.900
Phatr34317
Dolichol phosphate glucosyltransferase (320 aa)
   
   
 
0.822
Phatr10976
Mannosyltransferase (370 aa)
       
 
  0.774
Phatr44574
Predicted protein (556 aa)
       
 
  0.757
Phatr44425
Alpha-mannosyltransferase (581 aa)
       
 
  0.757
Phatr22554
Mannosyltransferase (419 aa)
   
 
  0.637
Phatr45434
Nad-dependent epimerase/dehydratase (364 aa)
   
 
  0.623
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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