STRINGSTRING
Phatr45989 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr45989" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr45989Predicted protein (1008 aa)    
Predicted Functional Partners:
Phatr16704
Predicted protein (1045 aa)
     
  0.993
Phatr19982
Predicted protein (2347 aa)
     
  0.992
Phatr34712
Predicted protein (662 aa)
     
  0.991
Phatr43576
Predicted protein (483 aa)
     
  0.991
Phatr17408
Predicted protein (1303 aa)
     
  0.991
Phatr21983
Predicted protein (484 aa)
     
  0.991
Phatr13526
Predicted protein (321 aa)
     
  0.990
Phatr14572
Predicted protein (219 aa)
     
  0.990
Phatr49469
Predicted protein (522 aa)
     
  0.988
Phatr18599
Predicted protein (142 aa)
       
  0.988
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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