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Phatr46132 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46132" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46132Predicted protein (1007 aa)    
Predicted Functional Partners:
Ran1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (213 aa)
       
 
  0.898
Ran2
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (254 aa)
       
 
  0.898
Phatr42636
Predicted protein (897 aa)
     
 
  0.871
Phatr23582
Predicted protein (764 aa)
     
 
  0.849
Phatr45915
Predicted protein (1242 aa)
     
 
  0.822
Phatr26387
Predicted protein (1053 aa)
     
 
  0.659
Phatr54143
Predicted protein (1695 aa)
     
      0.619
Sec7C
Predicted protein (1838 aa)
     
      0.619
Phatr45854
Predicted protein (1689 aa)
     
 
  0.607
Phatr21667
Predicted protein (976 aa)
     
 
  0.587
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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