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Pt-KIF3 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-KIF3" - Kinesin family-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-KIF3Kinesin family-like protein (953 aa)    
Predicted Functional Partners:
Phatr43664
Predicted protein (655 aa)
     
  0.983
Phatr44165
Predicted protein (1356 aa)
     
  0.973
SMC2
Predicted protein (1213 aa)
     
  0.973
Phatr45008
Predicted protein (480 aa)
     
 
  0.971
Phatr12339
Predicted protein (275 aa)
     
 
  0.971
Phatr48922
Predicted protein (965 aa)
     
      0.960
Phatr49507
Predicted protein (1564 aa)
     
   
  0.958
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
  0.953
Phatr43122
MAP65_ASE1 (620 aa)
     
  0.899
Phatr21122
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
  0.889
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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